Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
sync_2705 | sync_2748 | Cellulase. | Unnamed protein product. | 0.671 |
sync_2745 | sync_2746 | Adenylate cyclase, putative; Identified by match to protein family HMM PF00211; match to protein family HMM PF05226. | Hypothetical protein; Identified by Glimmer2; putative. | 0.545 |
sync_2745 | sync_2747 | Adenylate cyclase, putative; Identified by match to protein family HMM PF00211; match to protein family HMM PF05226. | Hypothetical protein; Identified by Glimmer2; putative. | 0.545 |
sync_2745 | sync_2748 | Adenylate cyclase, putative; Identified by match to protein family HMM PF00211; match to protein family HMM PF05226. | Unnamed protein product. | 0.421 |
sync_2746 | sync_2745 | Hypothetical protein; Identified by Glimmer2; putative. | Adenylate cyclase, putative; Identified by match to protein family HMM PF00211; match to protein family HMM PF05226. | 0.545 |
sync_2746 | sync_2747 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.773 |
sync_2746 | sync_2748 | Hypothetical protein; Identified by Glimmer2; putative. | Unnamed protein product. | 0.510 |
sync_2747 | sync_2745 | Hypothetical protein; Identified by Glimmer2; putative. | Adenylate cyclase, putative; Identified by match to protein family HMM PF00211; match to protein family HMM PF05226. | 0.545 |
sync_2747 | sync_2746 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.773 |
sync_2747 | sync_2748 | Hypothetical protein; Identified by Glimmer2; putative. | Unnamed protein product. | 0.510 |
sync_2748 | sync_2705 | Unnamed protein product. | Cellulase. | 0.671 |
sync_2748 | sync_2745 | Unnamed protein product. | Adenylate cyclase, putative; Identified by match to protein family HMM PF00211; match to protein family HMM PF05226. | 0.421 |
sync_2748 | sync_2746 | Unnamed protein product. | Hypothetical protein; Identified by Glimmer2; putative. | 0.510 |
sync_2748 | sync_2747 | Unnamed protein product. | Hypothetical protein; Identified by Glimmer2; putative. | 0.510 |
sync_2748 | sync_2870 | Unnamed protein product. | ABC transporter permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.686 |
sync_2870 | sync_2748 | ABC transporter permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | Unnamed protein product. | 0.686 |