STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_2797Possible DNA polymerase III beta subunit, C-te. (234 aa)    
Predicted Functional Partners:
gidA
Glucose-inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
       0.729
sync_1332
Conserved hypothetical protein.
  
     0.709
sync_1900
Conserved hypothetical protein.
  
     0.631
dnaB
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
     
 0.620
sync_2615
Conserved hypothetical.
  
     0.617
sync_1343
Conserved hypothetical protein; Identified by similarity to GB:CAE20910.1.
  
     0.614
sync_0306
Repeats containing protein.
  
     0.599
sync_2139
Conserved hypothetical protein.
  
     0.574
sync_1880
Uncharacterized conserved protein; Identified by match to protein family HMM PF04357.
  
     0.573
sync_2099
Uncharacterized protein.
  
     0.571
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.