STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_2839Possible high light inducible protein. (100 aa)    
Predicted Functional Partners:
sync_0291
Conserved hypothetical protein.
  
     0.709
sync_2084
Conserved hypothetical protein.
  
     0.695
sync_2840
Hypothetical protein; Identified by Glimmer2; putative.
       0.682
sync_1332
Conserved hypothetical protein.
  
     0.667
sync_2274
Ferredoxin-thioredoxin reductase variable chain.
  
     0.655
sync_1356
Hypothetical protein.
  
     0.647
sync_2139
Conserved hypothetical protein.
  
     0.643
sync_1329
Conserved hypothetical protein.
  
     0.624
kaiA
Circadian clock protein KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC he [...]
  
     0.621
sync_1019
Conserved hypothetical protein; Identified by similarity to GB:CAE07461.1.
  
     0.620
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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