STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_2867Amino acid permease family protein; Identified by match to protein family HMM PF00324. (531 aa)    
Predicted Functional Partners:
sync_0361
Glycosidase; Identified by match to protein family HMM PF00128.
   
 0.803
sync_0567
Trehalose synthase; Identified by match to protein family HMM PF00128.
   
 0.803
sync_0570
Identified by match to protein family HMM PF00128.
   
 0.803
sync_2866
Aminotransferases class-IV; Identified by match to protein family HMM PF01063.
  
  
 0.719
sync_2865
Possible p-aminobenzoate synthetase; Identified by match to protein family HMM PF00425.
   
 
 0.712
queC
exsB protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.
       0.697
sync_2911
Chloride transporter, chloride channel (ClC) family protein; Identified by match to protein family HMM PF00654.
 
 
 0.693
sync_0156
Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.
  
 
 0.688
sync_2272
Hypothetical protein.
    
 0.598
sync_0154
Membrane protein, putative.
  
 
 0.534
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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