sync_2868 protein (Synechococcus sp. CC9311)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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co-expression

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[Homology]

Score

sync_2868

ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (235 aa)

Predicted Functional Partners:

sync_2870

0.999

sync_2871

0.997

sync_2872

0.991

sync_2869

0.986

ureE

0.695

ureF

0.693

ureD

0.693

ureG

0.649

sync_0634

0.596

sync_1638

0.552

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
sync_0634	sync_2868	sync_0634	sync_2868	Hydrophobic amino acid ABC transporter (HAAT) family, periplasmic amino acid-binding protein; Identified by match to protein family HMM PF01094.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.596
sync_0634	sync_2870	sync_0634	sync_2870	Hydrophobic amino acid ABC transporter (HAAT) family, periplasmic amino acid-binding protein; Identified by match to protein family HMM PF01094.	ABC transporter permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.	0.822
sync_0634	sync_2871	sync_0634	sync_2871	Hydrophobic amino acid ABC transporter (HAAT) family, periplasmic amino acid-binding protein; Identified by match to protein family HMM PF01094.	High-affinity branched-chain amino acid transport protein LivH; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.	0.806
sync_1638	sync_2868	sync_1638	sync_2868	Heavy metal ABC transporter (HMT) family, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.552
sync_2868	sync_0634	sync_2868	sync_0634	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Hydrophobic amino acid ABC transporter (HAAT) family, periplasmic amino acid-binding protein; Identified by match to protein family HMM PF01094.	0.596
sync_2868	sync_1638	sync_2868	sync_1638	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Heavy metal ABC transporter (HMT) family, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.	0.552
sync_2868	sync_2869	sync_2868	sync_2869	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	0.986
sync_2868	sync_2870	sync_2868	sync_2870	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.	0.999
sync_2868	sync_2871	sync_2868	sync_2871	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	High-affinity branched-chain amino acid transport protein LivH; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.	0.997
sync_2868	sync_2872	sync_2868	sync_2872	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Urea ABC transporter, periplasmic urea-binding protein; Identified by similarity to GB:CAB70948.1.	0.991
sync_2868	ureD	sync_2868	sync_2876	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.	0.693
sync_2868	ureE	sync_2868	sync_2875	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Urease accessory protein E; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.	0.695
sync_2868	ureF	sync_2868	sync_2874	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.	0.693
sync_2868	ureG	sync_2868	sync_2873	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.	0.649
sync_2869	sync_2868	sync_2869	sync_2868	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.986
sync_2869	sync_2870	sync_2869	sync_2870	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.	0.998
sync_2869	sync_2871	sync_2869	sync_2871	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	High-affinity branched-chain amino acid transport protein LivH; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.	0.997
sync_2869	sync_2872	sync_2869	sync_2872	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	Urea ABC transporter, periplasmic urea-binding protein; Identified by similarity to GB:CAB70948.1.	0.987
sync_2869	ureD	sync_2869	sync_2876	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.	0.680
sync_2869	ureE	sync_2869	sync_2875	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	Urease accessory protein E; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.	0.719