Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sync_2925Uncharacterized membrane protein. (155 aa)    
Predicted Functional Partners:
thf1
Uncharacterized protein; May be involved in photosynthetic membrane biogenesis.
  
    0.780
sync_2150
Conserved hypothetical protein.
  
     0.774
psbO
Photosystem II manganese-stabilizing protein; Identified by match to protein family HMM PF01716.
  
    0.770
sync_1039
PsbP; Identified by match to protein family HMM PF01789.
  
     0.754
psaD
Photosystem I reaction center subunit II; Identified by match to protein family HMM PF02531.
  
     0.751
sync_2096
Conserved hypothetical protein.
  
     0.750
sync_2547
VKORC1/thioredoxin domain protein; Identified by match to protein family HMM PF07884.
  
    0.748
sync_1994
Identified by match to protein family HMM PF06485.
  
    0.747
sync_2612
Conserved NnrU/NnuR ortholog membrane enzyme.
  
     0.740
sync_2391
Putative membrane protein.
  
     0.739
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
Server load: low (8%) [HD]