STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_2938Esterase/lipase/thioesterase family active site. (504 aa)    
Predicted Functional Partners:
sync_2942
Uncharacterized membrane protein.
 
     0.819
uvrA
Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.779
sync_0306
Repeats containing protein.
  
     0.760
sync_2139
Conserved hypothetical protein.
  
     0.758
sync_1880
Uncharacterized conserved protein; Identified by match to protein family HMM PF04357.
  
     0.756
sync_1332
Conserved hypothetical protein.
  
     0.751
sync_1019
Conserved hypothetical protein; Identified by similarity to GB:CAE07461.1.
  
     0.744
sync_2059
Hypothetical protein; Identified by Glimmer2; putative; Belongs to the OprB family.
  
     0.733
sync_2628
Conserved hypothetical protein.
  
     0.726
sync_1227
Conserved hypothetical protein; Identified by similarity to GB:CAE20984.1.
  
     0.725
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.