STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA84650.1TIGRFAM: trehalose synthase, Pseudomonas stutzeri type. (689 aa)    
Predicted Functional Partners:
AGA84862.1
Hypothetical protein.
  
     0.675
AGA87431.1
Subtilisin-like serine protease; PFAM: Subtilase family.
  
     0.656
AGA84863.1
Hypothetical protein.
  
     0.599
AGA84651.1
Hypothetical protein.
       0.554
AGA86302.1
PFAM: Flagellar hook-length control protein FliK.
  
     0.527
AGA84884.1
Arginine:ornithine antiporter, APA family; PFAM: Amino acid permease; TIGRFAM: arginine/ornithine antiporter; transporter, basic amino acid/polyamine antiporter (APA) family; TC 2.A.3.2.3.
   
 0.507
AGA85268.1
Ethanolamine:proton symporter, EAT family; PFAM: Amino acid permease; TIGRFAM: ethanolamine permease; TC 2.A.3.5.1.
   
 0.507
AGA84649.1
PFAM: Predicted membrane protein (DUF2319).
       0.505
AGA84963.1
Hypothetical protein.
  
     0.487
AGA86691.1
Trehalose synthase; PFAM: Alpha amylase, catalytic domain; TIGRFAM: trehalose synthase-fused probable maltokinase; trehalose synthase.
  
 
 0.447
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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