Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA84754.1Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: Bacterial extracellular solute-binding proteins, family 3. (255 aa)    
Predicted Functional Partners:
AGA84749.1
PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
  
 
 0.925
AGA84751.1
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein.
    
 
0.924
AGA84770.1
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: Bacterial extracellular solute-binding proteins, family 3.
 
     0.722
AGA84769.1
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: Bacterial extracellular solute-binding proteins, family 3.
 
     0.713
AGA88549.1
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: Bacterial extracellular solute-binding proteins, family 3.
  
     0.701
AGA84953.1
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: Bacterial extracellular solute-binding proteins, family 3.
  
     0.596
AGA84755.1
Micrococcal nuclease-like nuclease; PFAM: Staphylococcal nuclease homologue.
       0.477
AGA84753.1
PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport; Belongs to the BCCT transporter (TC 2.A.15) family.
       0.473
AGA87421.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
  
     0.447
AGA86256.1
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: Bacterial extracellular solute-binding proteins, family 3.
  
     0.442
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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