STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AGA84790.1ABC-type Fe3+ transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein. (333 aa)    
Predicted Functional Partners:
AGA84791.1
ABC-type Fe3+ transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.998
AGA85853.1
ABC-type spermidine/putrescine transport system, ATPase component; PFAM: ABC transporter; TOBE domain.
 
 
 0.962
AGA85723.1
Putative iron-regulated protein; PFAM: Imelysin.
  
    0.884
AGA85439.1
PFAM: Fe2+ transport protein.
   
  
 0.850
AGA88226.1
Putative signal transduction protein with a C-terminal ATPase domain; PFAM: Histidine kinase.
   
   0.801
AGA87834.1
ABC-type Co2+ transport system, periplasmic component; PFAM: Nickel uptake substrate-specific transmembrane region.
   
    0.769
AGA87204.1
Sugar phosphate permease; PFAM: Major Facilitator Superfamily; TIGRFAM: benzoate transport.
  
  
 0.714
AGA88702.1
Sugar phosphate permease; PFAM: Major Facilitator Superfamily.
  
  
 0.714
AGA84789.1
PFAM: FAD binding domain; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family.
       0.704
AGA84786.1
PFAM: Aminopeptidase P, N-terminal domain; Metallopeptidase family M24.
       0.677
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.