STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA84818.1Hypothetical protein. (147 aa)    
Predicted Functional Partners:
AGA84819.1
Hypothetical protein; PFAM: Tripartite tricarboxylate transporter TctA family.
 
  
 0.986
AGA84817.1
Hypothetical protein; PFAM: Tripartite tricarboxylate transporter family receptor.
 
  
 0.984
AGA84820.1
PFAM: Putative ammonia monooxygenase; TIGRFAM: membrane protein AbrB duplication.
 
    0.968
AGA84982.1
Hypothetical protein.
     
  0.900
AGA84983.1
Hypothetical protein; PFAM: Tripartite tricarboxylate transporter family receptor.
 
  
 0.897
AGA84981.1
Hypothetical protein; PFAM: Tripartite tricarboxylate transporter TctA family.
 
  
 0.894
AGA84816.1
PFAM: outer membrane porin, OprD family.
  
    0.772
AGA84814.1
PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Two-component sensor kinase N-terminal.
 
   
 0.746
AGA84815.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
       0.603
AGA85931.1
Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily.
      
 0.467
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.