STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA84859.1PFAM: Bacterial regulatory proteins, tetR family. (214 aa)    
Predicted Functional Partners:
AGA84858.1
PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
 
  
 0.914
AGA84856.1
Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase.
 
  
 0.891
AGA84857.1
Hypothetical protein.
 
     0.774
AGA86989.1
Putative hydrolase or acyltransferase of alpha/beta superfamily; PFAM: Thioesterase domain.
  
     0.543
AGA84862.1
Hypothetical protein.
 
     0.524
AGA86866.1
PFAM: alpha/beta hydrolase fold.
  
     0.519
lifO
Lipase chaperone; May be involved in the folding of the extracellular lipase during its passage through the periplasm; Belongs to the lipase chaperone family.
  
     0.512
AGA84861.1
Glycosyl transferase; PFAM: GSPII_E N-terminal domain.
     
 0.469
AGA84860.1
PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
       0.458
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.455
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.