STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA84963.1Hypothetical protein. (389 aa)    
Predicted Functional Partners:
AGA84962.1
Hypothetical protein.
 
    0.953
AGA84964.1
PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.
 
     0.864
AGA87431.1
Subtilisin-like serine protease; PFAM: Subtilase family.
  
    0.772
AGA84862.1
Hypothetical protein.
  
     0.712
AGA86302.1
PFAM: Flagellar hook-length control protein FliK.
  
     0.655
AGA86297.1
PFAM: CheW-like domain.
  
     0.561
AGA84863.1
Hypothetical protein.
  
     0.544
AGA87424.1
Hypothetical protein.
  
     0.513
AGA87219.1
PilZ domain-containing protein; PFAM: PilZ domain.
  
     0.499
AGA86291.1
Chemotaxis protein; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
  
   
 0.490
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.