STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA85062.1PFAM: Glycosyltransferase family 9 (heptosyltransferase). (318 aa)    
Predicted Functional Partners:
AGA85064.1
PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family.
  
 
 0.890
AGA85060.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
 
 0.888
AGA85058.1
Lipopolysaccharide heptosyltransferase II; PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II.
  
  
 0.882
AGA85059.1
PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase I.
    
  0.880
AGA85061.1
Lipopolysaccharide kinase (Kdo/WaaP) family; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.
  
  
 0.866
AGA85063.1
PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family.
       0.814
AGA85065.1
Mn2+-dependent serine/threonine protein kinase; PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family.
       0.804
AGA85066.1
Putative carbamoyl transferase, NodU family; PFAM: Carbamoyltransferase.
  
    0.799
AGA85068.1
PFAM: Glycosyltransferase family 25 (LPS biosynthesis protein).
     
 0.775
AGA85067.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
  
 0.771
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.