Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA85094.1PFAM: Protein of unknown function (DUF330). (235 aa)    
Predicted Functional Partners:
AGA85076.1
Putative LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase.
  
     0.767
AGA87444.1
Hypothetical protein.
  
     0.739
AGA86257.1
Hypothetical protein.
  
     0.730
AGA87457.1
Hypothetical protein.
  
     0.721
AGA86630.1
PFAM: Domain of unknown function (DUF1883).
  
     0.712
AGA85063.1
PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family.
  
     0.706
AGA85624.1
Hypothetical protein.
  
     0.705
AGA86105.1
Hypothetical protein.
  
   
 0.684
AGA87794.1
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor.
 
     0.653
AGA87480.1
PFAM: Arc-like DNA binding domain.
  
     0.651
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.