Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGA85140.1 | AGA85141.1 | Psest_0533 | Psest_0534 | PFAM: Sel1 repeat. | Hypothetical protein. | 0.559 |
AGA85140.1 | AGA85144.1 | Psest_0533 | Psest_0537 | PFAM: Sel1 repeat. | PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; manually curated. | 0.461 |
AGA85140.1 | hemL | Psest_0533 | Psest_0535 | PFAM: Sel1 repeat. | PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase. | 0.589 |
AGA85140.1 | thiE | Psest_0533 | Psest_0536 | PFAM: Sel1 repeat. | Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.472 |
AGA85141.1 | AGA85140.1 | Psest_0534 | Psest_0533 | Hypothetical protein. | PFAM: Sel1 repeat. | 0.559 |
AGA85141.1 | AGA85144.1 | Psest_0534 | Psest_0537 | Hypothetical protein. | PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; manually curated. | 0.630 |
AGA85141.1 | AGA85145.1 | Psest_0534 | Psest_0538 | Hypothetical protein. | PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; 7TMR-DISM extracellular 2; His Kinase A (phosphoacceptor) domain. | 0.442 |
AGA85141.1 | hemL | Psest_0534 | Psest_0535 | Hypothetical protein. | PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase. | 0.797 |
AGA85141.1 | thiE | Psest_0534 | Psest_0536 | Hypothetical protein. | Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.647 |
AGA85144.1 | AGA85140.1 | Psest_0537 | Psest_0533 | PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; manually curated. | PFAM: Sel1 repeat. | 0.461 |
AGA85144.1 | AGA85141.1 | Psest_0537 | Psest_0534 | PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; manually curated. | Hypothetical protein. | 0.630 |
AGA85144.1 | AGA85145.1 | Psest_0537 | Psest_0538 | PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; manually curated. | PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; 7TMR-DISM extracellular 2; His Kinase A (phosphoacceptor) domain. | 0.533 |
AGA85144.1 | hemL | Psest_0537 | Psest_0535 | PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; manually curated. | PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase. | 0.711 |
AGA85144.1 | thiE | Psest_0537 | Psest_0536 | PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; manually curated. | Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.999 |
AGA85145.1 | AGA85141.1 | Psest_0538 | Psest_0534 | PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; 7TMR-DISM extracellular 2; His Kinase A (phosphoacceptor) domain. | Hypothetical protein. | 0.442 |
AGA85145.1 | AGA85144.1 | Psest_0538 | Psest_0537 | PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; 7TMR-DISM extracellular 2; His Kinase A (phosphoacceptor) domain. | PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; manually curated. | 0.533 |
AGA85145.1 | hemL | Psest_0538 | Psest_0535 | PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; 7TMR-DISM extracellular 2; His Kinase A (phosphoacceptor) domain. | PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase. | 0.438 |
AGA85145.1 | thiE | Psest_0538 | Psest_0536 | PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; 7TMR-DISM extracellular 2; His Kinase A (phosphoacceptor) domain. | Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.520 |
hemL | AGA85140.1 | Psest_0535 | Psest_0533 | PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase. | PFAM: Sel1 repeat. | 0.589 |
hemL | AGA85141.1 | Psest_0535 | Psest_0534 | PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase. | Hypothetical protein. | 0.797 |
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