Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA85189.1PFAM: Copper resistance protein B precursor (CopB); manually curated. (332 aa)    
Predicted Functional Partners:
AGA85187.1
PFAM: Multicopper oxidase; TIGRFAM: copper-resistance protein, CopA family; Tat (twin-arginine translocation) pathway signal sequence.
 
  
 0.988
AGA86140.1
PFAM: Multicopper oxidase; TIGRFAM: copper-resistance protein, CopA family; Tat (twin-arginine translocation) pathway signal sequence.
 
  
 0.956
AGA85851.1
PFAM: Multicopper oxidase.
 
  
 0.912
AGA85190.1
Hypothetical protein.
 
     0.840
AGA85188.1
Hypothetical protein.
       0.803
AGA86580.1
Hypothetical protein.
  
  
 0.725
AGA86823.1
Dissimilatory nitrite reductase (NO-forming), copper type apoprotein; PFAM: Multicopper oxidase; Copper binding proteins, plastocyanin/azurin family; TIGRFAM: nitrite reductase, copper-containing.
 
  
 0.701
AGA86148.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: heavy metal response regulator.
 
   
 0.481
AGA85185.1
Two component heavy metal response transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: heavy metal response regulator.
 
   
 0.478
AGA85203.1
Copper/silver-translocating P-type ATPase; PFAM: E1-E2 ATPase; YHS domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; manually curated.
 
   
 0.474
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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