Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA85243.1Siderophore synthetase component; PFAM: Ferric iron reductase FhuF-like transporter; IucA / IucC family. (602 aa)    
Predicted Functional Partners:
AGA85244.1
Acetyltransferase, ribosomal protein N-acetylase; PFAM: Siderophore biosynthesis protein domain.
  
 0.999
AGA85246.1
Lysine/ornithine N-monooxygenase.
 
  
 0.993
AGA85247.1
PLP-dependent enzyme, glutamate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase conserved domain.
 
  
 0.965
AGA85245.1
Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily.
 
   
 0.955
AGA85242.1
PFAM: FhuF 2Fe-2S C-terminal domain; TIGRFAM: siderophore ferric iron reductase, AHA_1954 family.
 
   
 0.909
AGA88542.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: Thioesterase domain; Phosphopantetheine attachment site; AMP-binding enzyme.
  
  
 0.501
AGA88541.1
4-hydroxyphenylpyruvate dioxygenase/hemolysin-like protein; PFAM: Xylose isomerase-like TIM barrel; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.493
AGA85240.1
Geranylgeranyl pyrophosphate synthase; PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
       0.486
xseB
Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
       0.486
AGA85248.1
PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
  
  
 0.467
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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