Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AGA85335.1Hypothetical protein. (54 aa)    
Predicted Functional Partners:
AGA86833.1
PFAM: Universal stress protein family.
   
    0.835
AGA87842.1
DnaK suppressor protein; PFAM: Prokaryotic dksA/traR C4-type zinc finger.
   
    0.767
AGA85941.1
PFAM: Protein of unknown function (DUF3079).
   
  
 0.602
AGA88060.1
Outer membrane protein W; PFAM: OmpW family.
   
    0.578
AGA87890.1
PFAM: Copper resistance protein D.
   
  
 0.552
AGA85336.1
Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.
       0.527
AGA86766.1
Oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
   
    0.491
AGA87059.1
Oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
   
    0.491
AGA88477.1
TIGR00153 family protein; PFAM: Protein of unknown function DUF47; TIGRFAM: TIGR00153 family protein.
   
  
 0.478
AGA88728.1
Multidrug resistance efflux pump; PFAM: HlyD family secretion protein.
   
    0.457
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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