STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA85373.1PFAM: Pterin 4 alpha carbinolamine dehydratase. (118 aa)    
Predicted Functional Partners:
AGA85374.1
Phenylalanine 4-hydroxylase; PFAM: Biopterin-dependent aromatic amino acid hydroxylase; TIGRFAM: phenylalanine-4-hydroxylase, monomeric form.
 
 0.994
AGA85372.1
PFAM: Aminotransferase class I and II.
  
  
 0.964
AGA88003.1
PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.836
AGA88002.1
PFAM: homogentisate 1,2-dioxygenase; TIGRFAM: homogentisate 1,2-dioxygenase.
  
  
 0.694
AGA88541.1
4-hydroxyphenylpyruvate dioxygenase/hemolysin-like protein; PFAM: Xylose isomerase-like TIM barrel; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.571
AGA85857.1
PFAM: Aminotransferase class I and II.
  
  
 0.557
AGA85375.1
Transcriptional regulator of aromatic amino acids metabolism; PFAM: ACT domain; Sigma-54 interaction domain; PAS fold.
     
 0.490
AGA88000.1
Maleylacetoacetate isomerase; PFAM: Glutathione S-transferase, N-terminal domain; TIGRFAM: maleylacetoacetate isomerase.
  
  
 0.461
AGA85371.1
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; PFAM: Phytanoyl-CoA dioxygenase (PhyH).
       0.447
AGA88129.1
2-phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
  
  
 0.413
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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