STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA85453.1Glycosidase; PFAM: Domain of unknown function (DUF1921); Starch binding domain; Alpha amylase, catalytic domain; Belongs to the glycosyl hydrolase 13 family. (548 aa)    
Predicted Functional Partners:
AGA85890.1
Alpha-1,6-glucosidase, pullulanase-type; PFAM: Domain of unknown function (DUF3372); Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Bacterial pullanase-associated domain; TIGRFAM: alpha-1,6-glucosidases, pullulanase-type; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.825
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
      
 0.628
AGA85456.1
Maltose-binding periplasmic protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family.
 
  
 0.581
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
  
 0.508
AGA84884.1
Arginine:ornithine antiporter, APA family; PFAM: Amino acid permease; TIGRFAM: arginine/ornithine antiporter; transporter, basic amino acid/polyamine antiporter (APA) family; TC 2.A.3.2.3.
   
 0.507
AGA85268.1
Ethanolamine:proton symporter, EAT family; PFAM: Amino acid permease; TIGRFAM: ethanolamine permease; TC 2.A.3.5.1.
   
 0.507
AGA85457.1
Permease component of ABC-type sugar transporter; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  
 0.485
AGA85458.1
ABC-type maltose transport systems, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  
 0.476
AGA85452.1
Maltoporin (phage lambda and maltose receptor); PFAM: LamB porin.
 
   
 0.450
AGA86691.1
Trehalose synthase; PFAM: Alpha amylase, catalytic domain; TIGRFAM: trehalose synthase-fused probable maltokinase; trehalose synthase.
  
 
 0.447
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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