STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA85508.1PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. (336 aa)    
Predicted Functional Partners:
AGA85509.1
Gluconolactonase; PFAM: Major royal jelly protein.
  
    0.655
AGA85507.1
Transcriptional regulator; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; Belongs to the LysR transcriptional regulatory family.
       0.588
AGA85506.1
Hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase.
 
    0.578
AGA88542.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: Thioesterase domain; Phosphopantetheine attachment site; AMP-binding enzyme.
  
 
 0.555
AGA85511.1
PFAM: Nitroreductase family.
       0.472
AGA85510.1
ABC-type proline/glycine betaine transport system, periplasmic component; PFAM: Substrate binding domain of ABC-type glycine betaine transport system.
       0.450
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.