STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA85566.1PFAM: Uncharacterized protein conserved in bacteria (DUF2236). (291 aa)    
Predicted Functional Partners:
AGA85565.1
Putative SAM-dependent methyltransferase; PFAM: S-adenosylmethionine-dependent methyltransferase; Belongs to the methyltransferase superfamily.
       0.748
pgi
PFAM: Phosphoglucose isomerase; Belongs to the GPI family.
  
    0.695
AGA85563.1
PFAM: Protein of unknown function (DUF2845).
       0.609
AGA85562.1
PFAM: Protein of unknown function (DUF2845).
       0.521
AGA85564.1
Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: Domain of Unknown Function (DUF748).
       0.498
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.