Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
AGA85756.1Nucleoside-binding outer membrane protein; PFAM: Nucleoside-specific channel-forming protein, Tsx. (275 aa)    
Predicted Functional Partners:
AGA85237.1
PFAM: Uncharacterised protein family (UPF0259).
  
     0.612
AGA85619.1
Uncharacterized protein involved in chromosome partitioning.
  
     0.596
AGA85757.1
PFAM: Permease family; TIGRFAM: uracil-xanthine permease; xanthine permease.
  
    0.596
AGA85620.1
Hypothetical protein.
  
     0.593
AGA85618.1
Hypothetical protein.
  
     0.588
AGA86396.1
PFAM: Protein of unknown function (DUF2937).
  
     0.560
AGA88354.1
PFAM: Curlin associated repeat.
  
     0.500
AGA88655.1
Hypothetical protein.
  
     0.497
AGA87431.1
Subtilisin-like serine protease; PFAM: Subtilase family.
  
     0.470
AGA85755.1
Nucleoside-binding outer membrane protein; PFAM: Nucleoside-specific channel-forming protein, Tsx.
 
    
0.464
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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