STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA85899.1FHA domain-containing protein; PFAM: FHA domain. (284 aa)    
Predicted Functional Partners:
AGA85900.1
PFAM: Protein kinase domain.
 
 
 
 0.964
AGA87016.1
PFAM: Dehydrogenase E1 component; Transketolase, pyrimidine binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component.
    
 
 0.881
AGA86475.1
Serine/threonine protein phosphatase; PFAM: Protein kinase domain.
 
 
 0.850
AGA85901.1
Serine/threonine protein phosphatase; PFAM: Stage II sporulation protein E (SpoIIE).
 
 
 0.836
AGA86931.1
Serine/threonine protein phosphatase; PFAM: Protein kinase domain; Stage II sporulation protein E (SpoIIE).
  
 
 0.830
AGA84728.1
PFAM: Predicted integral membrane protein (DUF2282).
   
    0.821
AGA88717.1
PFAM: Protein kinase domain.
 
 
 
 0.816
AGA86488.1
PFAM: Bacterial NAD-glutamate dehydrogenase.
    
 
 0.802
AGA86549.1
Type II secretory pathway, component PulD; PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein.
 
  
 0.799
AGA86279.1
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
  
 
 0.776
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.