STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
AGA85909.1Putative membrane protein; PFAM: Protein of unknown function (DUF1624). (387 aa)    
Predicted Functional Partners:
AGA85912.1
Putative protease of the Abi (CAAX) family; PFAM: CAAX amino terminal protease family.
  
    0.848
AGA87395.1
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor.
 
  
 0.633
AGA88050.1
PFAM: Protein of unknown function (DUF2796).
  
    0.558
AGA84991.1
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor.
 
  
 0.525
AGA88051.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
   
    0.514
AGA85340.1
Putative GTPase, G3E family; PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain.
   
    0.513
AGA85910.1
Hypothetical protein; PFAM: 3-demethylubiquinone-9 3-methyltransferase.
       0.481
AGA84688.1
PFAM: Protein of unknown function (DUF1458).
      
 0.472
AGA87634.1
Putative Fe-S protein; PFAM: Protein of unknown function (DUF1289).
      
 0.472
AGA85911.1
Hypothetical protein; PFAM: YCII-related domain.
       0.461
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.