STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AGA85912.1Putative protease of the Abi (CAAX) family; PFAM: CAAX amino terminal protease family. (249 aa)    
Predicted Functional Partners:
AGA85909.1
Putative membrane protein; PFAM: Protein of unknown function (DUF1624).
  
    0.848
AGA85913.1
Putative periplasmic protein.
       0.773
AGA88729.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter; ABC-2 type transporter.
  
  
 0.744
AGA84932.1
Putative membrane protein; PFAM: ABC-2 type transporter.
 
  
 0.555
AGA85914.1
Hypothetical protein; PFAM: MOSC domain; 3-alpha domain.
       0.544
AGA85911.1
Hypothetical protein; PFAM: YCII-related domain.
       0.505
AGA87043.1
Aconitase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
     
 0.500
AGA85511.1
PFAM: Nitroreductase family.
  
  
 0.496
AGA86427.1
PFAM: Nitroreductase family.
  
  
 0.496
AGA87511.1
PFAM: Nitroreductase family; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase.
  
  
 0.496
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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