Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
AGA86029.1PFAM: Uncharacterized protein conserved in bacteria (DUF2066). (349 aa)    
Predicted Functional Partners:
AGA86026.1
PFAM: Protein of unknown function (DUF3108).
 
    0.874
AGA86031.1
PFAM: Bacterial dnaA protein; TIGRFAM: DnaA regulatory inactivator Hda; Belongs to the DnaA family. HdA subfamily.
       0.761
AGA85319.1
Membrane protein required for beta-lactamase induction; PFAM: CobD/Cbib protein.
  
     0.759
AGA87364.1
Hypothetical protein.
  
     0.719
AGA84784.1
TIGRFAM: TIGR02449 family protein.
  
     0.681
AGA86297.1
PFAM: CheW-like domain.
  
     0.681
AGA84915.1
Chemotaxis signal transduction protein; PFAM: CheW-like domain.
  
     0.674
AGA85095.1
Putative membrane protein affecting hemolysin expression; PFAM: HAMP domain; Bacterial virulence factor haemolysin.
  
     0.669
AGA87099.1
Hypothetical protein; PFAM: Sporulation related domain.
  
     0.661
AGA86030.1
Putative permease; PFAM: Domain of unknown function DUF20.
       0.658
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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