STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA86033.1PFAM: NADPH-dependent FMN reductase; TIGRFAM: NAD(P)H:quinone oxidoreductase, type IV; Belongs to the WrbA family. (201 aa)    
Predicted Functional Partners:
AGA87253.1
Putative NADPH-quinone reductase (modulator of drug activity B); PFAM: Flavodoxin-like fold.
    
 0.918
AGA86130.1
PFAM: NADPH-dependent FMN reductase; TIGRFAM: NAD(P)H:quinone oxidoreductase, type IV.
  
  
 
0.915
AGA87086.1
PFAM: NADPH-dependent FMN reductase; TIGRFAM: NAD(P)H:quinone oxidoreductase, type IV.
  
  
 
0.913
ubiE
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
     
  0.900
AGA86034.1
PFAM: ArsC family; TIGRFAM: arsenate reductase (glutaredoxin).
  
    0.832
AGA86032.1
PFAM: Predicted membrane protein (DUF2069).
       0.798
AGA84644.1
PFAM: Bacterial protein of unknown function (DUF883).
   
    0.741
AGA86046.1
DNA-binding ferritin-like protein (oxidative damage protectant); PFAM: Ferritin-like domain; Belongs to the Dps family.
  
  
 0.738
AGA88043.1
Hypothetical protein.
   
    0.652
AGA88150.1
PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain.
   
    0.642
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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