STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA86214.1PFAM: Glycerophosphoryl diester phosphodiesterase family. (240 aa)    
Predicted Functional Partners:
AGA84839.1
PFAM: Glycerophosphoryl diester phosphodiesterase family.
     
 0.932
eutC
Ethanolamine ammonia-lyase, small subunit; PFAM: Ethanolamine ammonia-lyase light chain (EutC); Belongs to the EutC family.
     
  0.900
AGA85267.1
PFAM: Ethanolamine ammonia lyase large subunit (EutB).
     
  0.900
AGA86215.1
Hypothetical protein.
       0.862
AGA86216.1
PilZ domain-containing protein; PFAM: PilZ domain.
       0.862
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.816
AGA86007.1
Glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
 0.788
AGA87281.1
Glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
 0.788
lolD
Lipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
       0.736
AGA86421.1
PFAM: Adenylate and Guanylate cyclase catalytic domain; MASE2 domain.
    
 
 0.679
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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