Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA86422.1Putative membrane protein; PFAM: Protein of unknown function (DUF962). (105 aa)    
Predicted Functional Partners:
AGA88273.1
Putative membrane protein; PFAM: Protein of unknown function (DUF962).
  
     0.720
AGA86421.1
PFAM: Adenylate and Guanylate cyclase catalytic domain; MASE2 domain.
       0.690
AGA86423.1
DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.
 
     0.603
AGA88005.1
PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
    0.496
AGA88701.1
Putative alpha/beta hydrolase; PFAM: Putative lysophospholipase.
 
     0.481
AGA85938.1
Putative alpha/beta hydrolase; PFAM: Putative lysophospholipase.
 
     0.419
AGA85374.1
Phenylalanine 4-hydroxylase; PFAM: Biopterin-dependent aromatic amino acid hydroxylase; TIGRFAM: phenylalanine-4-hydroxylase, monomeric form.
  
     0.413
AGA86424.1
PFAM: Protein of unknown function (DUF808).
       0.405
AGA84859.1
PFAM: Bacterial regulatory proteins, tetR family.
  
     0.403
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.