Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA86444.1ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (280 aa)    
Predicted Functional Partners:
AGA86442.1
ABC-type sugar transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein.
 
 0.999
AGA86443.1
Permease component of ABC-type sugar transporter; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.999
AGA86445.1
ATPase component of ABC-type sugar transporter; PFAM: ABC transporter; TOBE domain.
 
 0.999
AGA85464.1
ATPase component of ABC-type sugar transporter; PFAM: ABC transporter; TOBE domain.
 
 
 0.988
AGA85457.1
Permease component of ABC-type sugar transporter; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.987
AGA86441.1
PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
 
     0.749
AGA85456.1
Maltose-binding periplasmic protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family.
 
   
 0.724
AGA86446.1
Maltoporin (phage lambda and maltose receptor); PFAM: LamB porin.
 
   
 0.689
AGA86660.1
PFAM: Bacterial regulatory proteins, lacI family; family.
 
   
 0.575
glk-2
PFAM: Glucokinase; TIGRFAM: glucokinase, proteobacterial type; Belongs to the bacterial glucokinase family.
 
   
 0.482
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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