Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA86468.1Putative photosystem II stability/assembly factor-like protein; PFAM: BNR/Asp-box repeat. (363 aa)    
Predicted Functional Partners:
AGA86469.1
Putative RND superfamily exporter; PFAM: Patched family; MMPL family.
 
  
 0.993
AGA85686.1
PFAM: Protein of unknown function (DUF1302).
 
    0.891
AGA84880.1
PFAM: Protein of unknown function (DUF1329).
 
  
 0.882
AGA85687.1
PFAM: Protein of unknown function (DUF1329).
 
  
 0.882
AGA87727.1
PFAM: Protein of unknown function (DUF1329).
 
  
 0.882
AGA86467.1
PFAM: Domain of unknown function (DUF3458); Peptidase family M1; TIGRFAM: aminopeptidase N, Escherichia coli type.
       0.515
AGA86463.1
PFAM: Calcineurin-like phosphoesterase.
 
   
 0.438
AGA86299.1
PFAM: Protein of unknown function (DUF2802).
  
     0.428
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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