STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA86490.1PFAM: Protein of unknown function (DUF2835). (73 aa)    
Predicted Functional Partners:
AGA86489.1
Hypothetical protein.
       0.709
pyrD
Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
       0.704
AGA86550.1
Hypothetical protein.
  
     0.525
AGA86603.1
HDOD domain-containing protein; PFAM: HDOD domain.
  
     0.522
AGA86106.1
Hypothetical protein.
  
     0.492
AGA86488.1
PFAM: Bacterial NAD-glutamate dehydrogenase.
 
     0.485
AGA87532.1
DnaJ-class molecular chaperone with C-terminal Zn finger domain; PFAM: DnaJ domain; DNA-J related protein.
  
    0.482
AGA86276.1
PFAM: Flagellar hook-length control protein FliK.
  
     0.469
AGA85563.1
PFAM: Protein of unknown function (DUF2845).
  
    0.467
AGA87683.1
Hypothetical protein.
  
     0.465
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.