STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA86578.1Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TIGRFAM: ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system. (395 aa)    
Predicted Functional Partners:
AGA86576.1
PQQ-dependent catabolism-associated beta-propeller protein; PFAM: Cytochrome D1 heme domain; 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: PQQ-dependent catabolism-associated beta-propeller protein; 40-residue YVTN family beta-propeller repeat.
 
  
 0.968
AGA86575.1
PFAM: ABC transporter; TIGRFAM: ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system.
 
    0.962
AGA86574.1
PFAM: ABC-2 type transporter; TIGRFAM: alcohol ABC transporter, permease protein; daunorubicin resistance ABC transporter membrane protein.
 
     0.960
AGA86573.1
PFAM: Rhodanese-like domain; TIGRFAM: PQQ-dependent catabolism-associated CXXCW motif protein.
 
     0.900
AGA86577.1
PFAM: Sel1 repeat.
 
 
   0.886
AGA86580.1
Hypothetical protein.
 
  
 0.878
AGA85917.1
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component; PFAM: NMT1/THI5 like.
 
     0.804
AGA86590.1
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: Bacterial extracellular solute-binding proteins, family 3.
 
    0.801
AGA86589.1
Cytochrome c, mono- and diheme variants family; PFAM: Cytochrome c.
 
     0.794
AGA86594.1
PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family.
 
    0.787
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.