Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA86617.1Putative sterol carrier protein; PFAM: SCP-2 sterol transfer family. (104 aa)    
Predicted Functional Partners:
AGA86618.1
Fructose-2,6-bisphosphatase; PFAM: Phosphoglycerate mutase family.
       0.756
AGA86166.1
Hypothetical protein.
  
     0.697
AGA86619.1
Inner membrane peptidase; PFAM: Peptidase family S49 N-terminal; Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type.
       0.639
AGA86615.1
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase.
       0.611
AGA86414.1
PFAM: Uncharacterised protein family (UPF0149); TIGRFAM: yecA family protein; Belongs to the UPF0149 family.
  
     0.590
AGA86616.1
Putative aminoglycoside phosphotransferase; PFAM: Phosphotransferase enzyme family.
       0.535
AGA88790.1
PFAM: Probable metal-binding protein (DUF2387); TIGRFAM: conserved hypothetical metal-binding protein.
  
     0.507
AGA86463.1
PFAM: Calcineurin-like phosphoesterase.
  
     0.505
AGA86620.1
Putative quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative quinone oxidoreductase, YhdH/YhfP family.
       0.473
AGA87217.1
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor.
  
     0.431
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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