STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA86626.1Hypothetical protein. (149 aa)    
Predicted Functional Partners:
AGA86627.1
PFAM: Protein kinase domain; Leucine Rich Repeat.
       0.729
AGA86628.1
Putative Fe-S-cluster redox enzyme; PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase; Belongs to the radical SAM superfamily. RlmN family.
       0.514
AGA86625.1
Molecular chaperone (small heat shock protein); PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family.
       0.481
AGA86629.1
Arabinose efflux permease family protein.
       0.465
AGA87736.1
PFAM: Protein of unknown function (DUF2726).
  
     0.452
AGA87257.1
PFAM: SpoU rRNA Methylase family.
  
     0.432
AGA85092.1
PFAM: Retroviral aspartyl protease; TIGRFAM: clan AA aspartic protease, TIGR02281 family.
  
     0.426
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.