Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA86665.1PFAM: Acetyltransferase (GNAT) family. (211 aa)    
Predicted Functional Partners:
AGA87219.1
PilZ domain-containing protein; PFAM: PilZ domain.
  
     0.704
AGA86667.1
Hypothetical protein; PFAM: Family of unknown function (DUF490).
 
     0.696
AGA86664.1
Exodeoxyribonuclease III; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth).
       0.686
AGA87480.1
PFAM: Arc-like DNA binding domain.
  
     0.678
AGA88801.1
Hypothetical protein.
  
     0.671
AGA87364.1
Hypothetical protein.
  
     0.651
AGA86977.1
acyl-CoA thioesterase.
  
    0.641
AGA86663.1
Phosphate ABC transporter substrate-binding protein, PhoT family; PFAM: OmpA family; TIGRFAM: phosphate binding protein.
   
 
 0.640
AGA86666.1
Outer membrane protein; PFAM: Surface antigen variable number repeat; Surface antigen.
       0.630
AGA86029.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2066).
  
     0.597
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.