STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA86667.1Hypothetical protein; PFAM: Family of unknown function (DUF490). (1222 aa)    
Predicted Functional Partners:
AGA86666.1
Outer membrane protein; PFAM: Surface antigen variable number repeat; Surface antigen.
 
 0.999
AGA86417.1
Putative esterase of the alpha-beta hydrolase superfamily; PFAM: Surface antigen variable number repeat; Patatin-like phospholipase; Surface antigen.
 
 
 0.930
AGA86630.1
PFAM: Domain of unknown function (DUF1883).
  
     0.705
AGA86665.1
PFAM: Acetyltransferase (GNAT) family.
 
     0.696
AGA84927.1
PFAM: Cytochrome C'.
 
     0.639
AGA86664.1
Exodeoxyribonuclease III; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth).
       0.626
AGA85605.1
Hypothetical protein.
  
     0.609
AGA84758.1
Uncharacterized protein involved in outer membrane biogenesis; PFAM: AsmA family.
  
   
 0.593
AGA85063.1
PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family.
  
     0.586
AGA86663.1
Phosphate ABC transporter substrate-binding protein, PhoT family; PFAM: OmpA family; TIGRFAM: phosphate binding protein.
       0.570
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.