STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA86776.1Putative protein-tyrosine phosphatase; PFAM: Dual specificity phosphatase, catalytic domain. (164 aa)    
Predicted Functional Partners:
AGA86778.1
Protein-tyrosine-phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase.
   
 
 0.851
AGA86780.1
Protein-tyrosine-phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase.
   
 
 0.837
AGA86777.1
PFAM: NADPH-dependent FMN reductase; TIGRFAM: arsenical resistance protein ArsH.
       0.834
AGA86774.1
PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
   
 0.775
AGA86775.1
Hypothetical protein; PFAM: Uncharacterised BCR, YnfA/UPF0060 family.
       0.768
AGA86779.1
Putative transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family.
       0.753
AGA85064.1
PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family.
    
 0.741
AGA85073.1
PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family.
    
 0.741
AGA87951.1
PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family.
    
 0.741
AGA86773.1
Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily.
 
   
 0.730
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.