Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA86783.1PFAM: Predicted permease. (458 aa)    
Predicted Functional Partners:
AGA86784.1
TIGRFAM: small redox-active disulfide protein 2.
 
  
 0.969
AGA86780.1
Protein-tyrosine-phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase.
 
  
 0.664
AGA86782.1
Arsenical-resistance protein; PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein.
  
  
 0.621
AGA86779.1
Putative transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family.
 
  
 0.542
AGA86778.1
Protein-tyrosine-phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase.
 
  
 0.532
AGA86785.1
Hypothetical protein.
       0.507
AGA86823.1
Dissimilatory nitrite reductase (NO-forming), copper type apoprotein; PFAM: Multicopper oxidase; Copper binding proteins, plastocyanin/azurin family; TIGRFAM: nitrite reductase, copper-containing.
  
  
 0.501
AGA85187.1
PFAM: Multicopper oxidase; TIGRFAM: copper-resistance protein, CopA family; Tat (twin-arginine translocation) pathway signal sequence.
  
  
 0.483
AGA85851.1
PFAM: Multicopper oxidase.
  
  
 0.483
AGA86140.1
PFAM: Multicopper oxidase; TIGRFAM: copper-resistance protein, CopA family; Tat (twin-arginine translocation) pathway signal sequence.
  
  
 0.483
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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