STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA86791.1Co/Zn/Cd efflux system component; PFAM: Cation efflux family; Heavy-metal-associated domain. (293 aa)    
Predicted Functional Partners:
AGA85209.1
PFAM: MerR family regulatory protein; MerR, DNA binding; TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator.
 
   
 0.721
AGA86793.1
PFAM: Copper binding periplasmic protein CusF; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
     
 0.553
AGA86792.1
PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
     
 0.544
AGA86794.1
PFAM: Outer membrane efflux protein.
     
 0.520
AGA85203.1
Copper/silver-translocating P-type ATPase; PFAM: E1-E2 ATPase; YHS domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; manually curated.
 
  
 0.436
AGA85331.1
Copper/silver-translocating P-type ATPase; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; copper ion binding protein; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.
 
  
 0.420
AGA86146.1
PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper ion binding protein; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.
 
  
 0.412
AGA86781.1
Putative flavoprotein involved in K+ transport; PFAM: Flavin-binding monooxygenase-like; Thi4 family.
  
    0.411
AGA87393.1
Putative flavoprotein involved in K+ transport; PFAM: Flavin-binding monooxygenase-like.
  
    0.411
AGA87264.1
Putative transcriptional regulator; PFAM: MerR family regulatory protein; MerR, DNA binding; TIGRFAM: Hg(II)-responsive transcriptional regulator.
 
   
 0.400
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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