Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA86880.1Short-chain dehydrogenase of unknown substrate specificity; PFAM: short chain dehydrogenase. (262 aa)    
Predicted Functional Partners:
AGA88011.1
PFAM: short chain dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase.
  
 
 
0.925
AGA85643.1
PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit.
     
  0.900
AGA85644.1
PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit.
     
  0.900
AGA85645.1
Isopropylmalate/homocitrate/citramalate synthase; PFAM: HMGL-like.
     
  0.900
AGA87176.1
Isopropylmalate/homocitrate/citramalate synthase; PFAM: HMGL-like.
     
  0.900
AGA86881.1
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase.
 
 
  
0.834
AGA86879.1
PFAM: Fatty acid desaturase.
     
 0.779
AGA86883.1
Uncharacterized protein, putative amidase; PFAM: Creatinine amidohydrolase.
       0.777
AGA86884.1
Nicotinamidase-like amidase; PFAM: Isochorismatase family.
  
    0.775
AGA86882.1
Putative permease; PFAM: EamA-like transporter family.
       0.773
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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