STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA86900.1PFAM: Glutathione S-transferase, C-terminal domain. (339 aa)    
Predicted Functional Partners:
mdcC
Malonate decarboxylase acyl carrier protein; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism.
      
 0.650
AGA86895.1
PFAM: DsrE/DsrF-like family; TIGRFAM: sulfur relay protein TusD/DsrE.
       0.638
AGA86896.1
PFAM: DsrE/DsrF-like family; TIGRFAM: sulfur relay protein TusC/DsrF; Belongs to the DsrF/TusC family.
       0.638
AGA86897.1
PFAM: DsrH like protein; TIGRFAM: sulfur relay protein TusB/DsrH.
       0.638
AGA86898.1
Sulfur relay protein, TusE/DsrC/DsvC family; Part of a sulfur-relay system.
       0.638
AGA86899.1
Anthranilate phosphoribosyltransferase; PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain.
       0.638
AGA86894.1
FtsH-interacting integral membrane protein; PFAM: Uncharacterised protein family UPF0005; Belongs to the BI1 family.
  
    0.634
AGA87501.1
Putative translation initiation inhibitor, yjgF family; PFAM: Endoribonuclease L-PSP.
  
  
 0.584
AGA86698.1
Hypothetical protein; PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase.
     
 0.550
AGA84918.1
PFAM: Cytochrome b(N-terminal)/b6/petB.
     
 0.505
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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