STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA86989.1Putative hydrolase or acyltransferase of alpha/beta superfamily; PFAM: Thioesterase domain. (299 aa)    
Predicted Functional Partners:
AGA86988.1
PFAM: alpha/beta hydrolase fold.
  
  
 0.934
AGA86990.1
Hypothetical protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1.
     
 0.887
AGA87961.1
AMP-forming long-chain acyl-CoA synthetase; PFAM: AMP-binding enzyme.
   
 
 0.690
AGA86991.1
Phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphohistidine phosphatase SixA.
 
     0.623
AGA86986.1
Putative permease; PFAM: Domain of unknown function DUF20.
       0.595
AGA88542.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: Thioesterase domain; Phosphopantetheine attachment site; AMP-binding enzyme.
  
 
 0.591
AGA84669.1
PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; Belongs to the GST superfamily.
     
 0.589
AGA86992.1
Hypothetical protein.
       0.567
AGA84859.1
PFAM: Bacterial regulatory proteins, tetR family.
  
     0.543
AGA84766.1
PFAM: Uncharacterized conserved protein (DUF2164).
  
     0.542
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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