Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AGA87429.1TIGR03440 family protein; PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: TIGR03440 family protein. (431 aa)    
Predicted Functional Partners:
AGA87430.1
Putative methyltransferase; PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase.
  
 0.998
AGA87431.1
Subtilisin-like serine protease; PFAM: Subtilase family.
       0.815
AGA87428.1
PFAM: Protein of unknown function (DUF1264).
       0.524
AGA88542.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: Thioesterase domain; Phosphopantetheine attachment site; AMP-binding enzyme.
  
  
 0.510
AGA86395.1
PFAM: Glutamine amidotransferases class-II.
  
  
 0.500
AGA85246.1
Lysine/ornithine N-monooxygenase.
  
  
 0.485
AGA86475.1
Serine/threonine protein phosphatase; PFAM: Protein kinase domain.
  
  
 0.446
AGA86931.1
Serine/threonine protein phosphatase; PFAM: Protein kinase domain; Stage II sporulation protein E (SpoIIE).
  
  
 0.446
AGA86248.1
Selenocysteine lyase; PFAM: Aminotransferase class-V.
 
  
 0.425
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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