Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA87638.1Hypothetical protein; PFAM: L,D-transpeptidase catalytic domain. (167 aa)    
Predicted Functional Partners:
AGA86860.1
Hypothetical protein; PFAM: L,D-transpeptidase catalytic domain.
 
  
 0.774
AGA87637.1
ADP-ribose pyrophosphatase; PFAM: NUDIX domain.
       0.754
AGA87636.1
NTP pyrophosphohydrolase; PFAM: NUDIX domain.
       0.653
AGA87634.1
Putative Fe-S protein; PFAM: Protein of unknown function (DUF1289).
       0.611
AGA87635.1
Isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase.
       0.611
purT
Formate-dependent phosphoribosylglycinamide formyltransferase; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family.
       0.582
AGA88481.1
Hypothetical protein; PFAM: Putative peptidoglycan binding domain; L,D-transpeptidase catalytic domain.
  
   
 0.515
AGA86221.1
PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2.
     
 0.506
AGA85624.1
Hypothetical protein.
     
 0.482
AGA86985.1
Putative esterase of the alpha-beta hydrolase superfamily; PFAM: Patatin-like phospholipase.
      
 0.482
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.