Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA87798.1ABC-type transport system involved in resistance to organic solvents, ATPase component; PFAM: ABC transporter. (271 aa)    
Predicted Functional Partners:
AGA87796.1
ABC-type transport system involved in resistance to organic solvents, periplasmic component; PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein.
 
 0.999
AGA87797.1
PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein.
 
 0.999
AGA88724.1
PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; manually curated.
 
 0.995
AGA87794.1
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor.
   
 0.994
AGA87795.1
ABC-type transport system involved in resistance to organic solvents, auxiliary component; PFAM: Toluene tolerance, Ttg2.
 
 
 0.977
AGA88726.1
ABC-type transport system involved in resistance to organic solvents, periplasmic component; PFAM: mce related protein.
  
 0.964
AGA88725.1
ABC-type transport system involved in resistance to organic solvents, ATPase component; PFAM: ABC transporter.
  
  
 
0.910
AGA85256.1
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); PFAM: STAS domain.
  
 
 0.788
AGA87793.1
Putative membrane protein; PFAM: Phosphate-starvation-inducible E; Belongs to the PsiE family.
       0.759
lptC
Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA.
     
 0.624
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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