STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA87831.1Outer membrane receptor for ferrienterochelin and colicins; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor. (743 aa)    
Predicted Functional Partners:
AGA88055.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.880
AGA86055.1
Cell division and transport-associated protein TolA; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TolA protein; TonB family C-terminal domain; TC 2.C.1.2.1.
  
 
 0.859
AGA86935.1
Periplasmic protein TonB, links inner and outer membranes; PFAM: Gram-negative bacterial tonB protein.
  
 
 0.859
AGA87834.1
ABC-type Co2+ transport system, periplasmic component; PFAM: Nickel uptake substrate-specific transmembrane region.
 
     0.793
AGA88806.1
PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor.
  
  
 0.789
AGA87833.1
PFAM: Predicted periplasmic protein (DUF2271).
 
   
 0.784
AGA84906.1
TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
  
 
 0.777
AGA87832.1
Hypothetical protein; PFAM: PepSY-associated TM helix.
 
     0.771
AGA85597.1
ABC-type Fe3+-siderophore transport system, permease component; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.725
AGA88606.1
PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor.
 
  
 0.681
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.