Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
AGA87861.1TIGRFAM: type IV pilus modification protein PilV; prepilin-type N-terminal cleavage/methylation domain. (156 aa)    
Predicted Functional Partners:
AGA87862.1
Tfp pilus assembly protein PilW.
 
  
 0.993
AGA87863.1
Tfp pilus assembly protein PilX.
 
  
 0.992
AGA87864.1
Tfp pilus assembly protein, tip-associated adhesin PilY1; PFAM: Neisseria PilC protein.
 
  
 0.989
AGA87865.1
PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
  
 0.978
AGA87860.1
PFAM: Prokaryotic N-terminal methylation motif; Type II transport protein GspH; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
  
 0.973
AGA87859.1
PFAM: Prokaryotic N-terminal methylation motif; Type II transport protein GspH; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; manually curated.
 
  
 0.929
AGA85401.1
PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
  
 0.905
AGA85396.1
PFAM: Prokaryotic N-terminal methylation motif; Type II transport protein GspH; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
  
 0.877
AGA85399.1
TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
  
 0.863
AGA88195.1
PFAM: Fimbrial assembly protein (PilN).
 
  
 0.835
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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